1Department of Physics, Madras Christian College, East Tambaram 600059, Tamil Nadu, India
2University of Madras, Chennai, 600005, Tamil Nadu, India
3Department of Zoology, Madras Christian College, East Tambaram 600059, Tamil Nadu, India
Correspondence: Johanan Christian Prasana
Received: 29 April, 2025; Accepted: 11 June, 2025; Published: 27 June, 2025
Citation: Prasana, J. C., Eunice, E., Benny, D., Rifana, B. A., & Freddy, A. J. (2025). Rectifying ion channels and membrane potential for cancer therapy: A hypothesis. Sci Academique, 6(1), 77–96
Abstract
Cell membrane potential and ion channels are crucial for cancer cell proliferation. Deviations in membrane potential may lead to a depolarization state, favoring cancer cell growth. Targeting ion channels and ensuring appropriate signals can reactivate tumor suppressor protein p53. This reactivation helps prevent tumor cells from bypassing regulatory checkpoints and promotes apoptosis. Enhancing ion channel activity and unmasking p53 can boost the body’s self-repair mechanisms. The optimization results for Levcromakalim are obtained through DFT calculations. UV-Vis, Frontier analysis, and Lipinski’s Rule of 5 highlight its potential for effective and favorable pharmacological effects. Molecular docking studies reveal that Levcromakalim effectively binds to the K_ATP channel protein. These theoretical findings suggest that Levcromakalim may effectively regulate membrane potential and reactivate p53, triggering critical checkpoints in cell division. This theoretical approach could be a significant step toward more effective cancer treatments and the ultimate goal of a cancer-free society.
Introduction
In all their splendor and versatility, Multicellular organisms dwindle to the cell with their remarkable adaptability to diverse functions across different organs, systems, and tissues. It performs incredible functions like emotional responses, creativity, learning, parallel processing, and multitasking with astounding processivity speeds of approximately one exaFLOP (1×1018 operation per second) in the brain, synthesizing proteins, hormones, immunological response, intra and inter-cellular communication and sending signals. Cellular function is challenging to comprehend in its entirety. Notwithstanding, cells respond dynamically to environmental stimuli, adapting their behavior and physiology to meet changing demands. Combined with all these activities, cellular division and homeostasis are a remarkable feat that the cell executes to survive, reproduce, and continue as a species. Figure 1 shows the schematic image of cell cycle checkpoints.

Figure 1: Schematic image of cell cycle checkpoints.
The cell cycle is a tightly coordinated and regulated event with G1, S, G2, and M, which ensures that each organism is genetically intact. This crucial regulatory maintenance of cell proliferation encompasses genetic stability and prevents uncontrolled cellular growth. TP53, often called p53, popularly termed the “guardian of the genome,” is crucial in preserving cellular integrity. Activation of p53 to cellular stress, DNA damage, hypoxia, loss of tumor suppressor gene, or oncogene activation orchestrates several downstream genetic events directing the cell towards DNA repair or apoptosis to maintain cellular homeostasis. Mutations on p53 or masking of p53 are among the most frequent alterations in human cancers, often resulting in dysregulated cell proliferation and tumor development. Also, tumor cells frequently bypass cell cycle checkpoints due to improper signals that mask the p53 protein, failing to activate downstream proteins like p21 to arrest the cell cycle when conditions are unfavorable [1-8]. Molecular docking has shown promise by identifying small compounds capable of binding to and stabilizing p53, restoring its tumor-suppressing abilities [9]. Consequently, p53 has become a focal point in cancer research, with therapeutic strategies aimed at restoring its function or mimicking its activity showing promise in preclinical and clinical studies.
The cell, with its remarkable versatility, precise regulation through the cell cycle, and the critical role of p53, characterizes the complexity and elegance of life. Understanding these processes provides insights into the mechanisms fundamental to health and disease, paving the way for innovations and evolution in medicine and biotechnology [10]. As scientists continue to unravel the mysteries of the cell, the potential for harnessing its capabilities to improve human health and combat diseases such as cancer grows ever brighter.
The cell membrane is a complex and dynamic structure essential for maintaining cellular function, communication through signaling, and homeostasis. The cellular barrier is enveloped with a differential voltage gradient called the membrane potential (Vm). Its selective permeability and the diverse roles of membrane proteins make it critical for numerous cellular processes. Separating the cellular contents from the extracellular environment is crucial for maintaining the cell’s structural integrity. The cell membrane is tailored to serve as a physical barrier, protecting the cell from mechanical damage, pathogens, and harmful environmental factors. This separation is critical in maintaining intra and inter-cellular communication without compromising cellular health and homeostasis [11,12]. Ion channels within the membrane space create membrane potential and trigger electrical signals to communicate inside the human system [13,14]. Enclosed by a lipid bilayer functioning as a selective barrier, the membrane regulates the transport of substances to and from the cell. Membrane ion channels regulate ion flow, impacting membrane potential (Vm) and cellular function. Phospholipids, the primary components of the membrane, prevent the free passage of hydrophilic molecules. The Goldman-Hodgkin-Ktz equation provides a mathematical model for understanding the factors determining the Vm [15,16].
Vm = [Na +]0 + P K +[K+]0 + P cl– [Cl–]0) / (P Na+ [Na]i + P k+ [K]i +P cl– [Cl–]i)
Vm is essential for regulating processes like cell growth, division, migration, and apoptosis, which is maintained by ion gradients by moving Na+, K+, Ca2+, and Cl− ions via specific channels. In normal cells, the membrane potential is tightly controlled and remains more negative, supporting normal cellular functions [17, 18].
Electrons play a crucial role in cell cycle checkpoints through their involvement in redox (reduction-oxidation) reactions, which are essential for maintaining the normal function of the p53 protein [19]. Disruptions in redox balance will impact membrane potential and may inhibit p53, potentially allowing damaged cells to proliferate uncontrollably [20,21]. Therefore, maintaining a proper redox state is vital for p53’s stability and ability to regulate the cell cycle and prevent cancerous growth [22].
Membrane potential values due to ion channels and probable diseases are presented in Table 1 [18]. Ion channels exhibit specific functions in cancer progression. Voltage-gated sodium channels overexpressed in cancers like breast and prostate, promoting metastasis. Similarly, Potassium Channels [23 – 28] may create a depolarization state responsible for MCF-7 breast cancer, to name a few. Imbalances in calcium and chloride channels promote dysregulated cell growth and migration [19]. The normal range of membrane potential is between -40mv and -80mv, which may be obtained from the Gaussian Distribution Curve. From Table 1, it can be predicted that favorable equilibrium conditions arise when the membrane potential is closer to the higher side of the standard value. Fluctuations in membrane potential, which might be due to action and resting potentials, within a depolarized state or a depolarized state of ions may lead to enhanced proliferation and reduced apoptosis. Maintaining the membrane potential in the normal range is a vital parameter to send proper signals to activate the p53, restoring its function in regulating the cell cycle and inducing apoptosis. Therefore, targeting these ion channels to maintain appropriate membrane potential throws light on potential therapeutic strategies in cancer treatment [15].
| S.No. | Membrane potential Vm(mV) | Probable diseases |
| 1 | 0 to -10 | Ovarian tumor
Leukemic myeloblast |
| 2 | -10 to -20 | Human hepatoma
Hela MDA-MB-231 breast cancer, cervical tumor |
| 3 | -30 to -40 | MDA-MB-468 breast cancer
Quail fibrosarcoma MCF-7 breast cancer |
| 4 | -50 to -55 | PC-3M prostate cancer |
Table 1: Membrane potential scale and probable diseases [18].
Implications of Membrane Potential
Ion channels are highly selective, meaning they only allow specific ions to pass through. This selective permeability is essential for maintaining the proper balance of ions inside and outside the cell [29]. The uneven distribution of ions, causing Vm, is kept in balance by the K_ATP channel, which is K+ ions-sensitive [30-33]. This maintains a membrane potential ranging from -40 mV to -80 mV [34]. Voltage-gated channels open or close in response to changes in Vm (charge difference across the membrane). Ligand-gated ion channels open or close when specific molecules (ligands) bind to them [35,36]. These channels help cells regulate the human system’s proper functioning by sending appropriate signals. Deviations from the specified range in the membrane potential (Table 1) may lead to a depolarization state (less negative), favoring cancer cell growth [37-39].
Approach to Cancer Therapy – Hypothesis
The pathway for p53 Activation is presented in Figure 2. Depolarization conditions may inhibit tumor suppressor protein p53, leading to improper cell division. By restoring the suitable ion channels, the depolarization condition of the membrane potential may be corrected to restore proper electrical signals to p53. These corrected electrical signals may unmask p53 [40,41] and enhance p53’s ability to control the cell cycle and promote cell apoptosis [38]. In light of this understanding, the hypothesis presented here focuses on controlling the electrical signals to activate p53, in order to control the cell cycle, rather than to focus on cancers that are assumed to suppress p53, which might lead to different types of cancers, in the present treatment.

Figure 2: Approach to cancer therapy flowchart.
Therapeutic Potential and Mechanism of Action of Levcromakalim in Cancer Cells
Levcromakalim is an organic compound with the molecular formula C16H18N2O3 containing 39 atoms, and Pa activity is 90.5% [58]. IUPAC name is (3S,4R)-3-Hydroxy-2,2-Dimethyl-4-(2-Oxopyrrolidin-1-yl)-3,4-Dihydrochromene-6-Carbonitrile and molar mass of 286.33 g/mol [42]. It has therapeutic applications in vascular, neurological, metabolic, and cancer. The title compound contains functional groups such as methoxy, hydroxy, and nitrile, which are critical for interacting with K_ATP channels to modulate the membrane potential [43,44].
Levcromakalim activates ATP-sensitive potassium channels (K_ATP), inducing changes in membrane potential that are essential for proper intracellular signaling [45]. The proper signals help to restore an electrochemical environment favorable to the activation of DNA damage response pathways, particularly those mediated by ATM/ATR kinases [46]. These kinases phosphorylate and stabilize p53 by preventing MDM2-mediated degradation, thereby enabling p53 to translocate into the nucleus, activate p21 expression, and initiate cell cycle arrest or apoptosis [47]. This interaction between Levcromakalim and the membrane potential has been supported through molecular docking studies with the K_ATP channel, suggesting its potential to modulate ion channel function and restore appropriate signaling. The compound’s influence on membrane potential and its role in the p53 reactivation pathway form the foundation of the proposed hypothesis, highlighting its therapeutic promise in targeting tumor suppressor pathways via ionic homeostasis.
This hypothesis work is an attempt made to bind human potassium channel K_ATP protein (5WTR-prokaryotic TRIC channel) with the ligand Levcromakalim. Levcromakalim is known to activate K_ATP channels, which regulate the flow of K⁺ ions across the cell membrane [48] that may send proper signals to activate p53, thereby rectifying the cell cycle to promote cell apoptosis. This methodology could trigger the self-repair mechanism of the human body.
A comprehensive literature review indicates that no studies employing DFT and molecular docking have been documented regarding Levcromakalim’s interaction with K_ATP channels [49-54].
Computational analysis
DFT is a computational method that provides insights into geometry, bonding, and reactivity [55]. GAUSSIAN 16W [56] package was employed in DFT calculations. B3LYP/6-311G++(d,p) is the basis set used. An optimized structure was obtained for Levcromakalim. UV-Vis spectra were performed using the TD-DFT method. Frontier analysis determines global reactivity parameters and evaluates toxicity. Pharmacological properties were assessed through the Swiss ADME online tool [57]. Bioactivity predictions were obtained using PASS online software [58]. Protein structure (5WTR) was sourced from the RCPDB [59]. Molecular docking was conducted using AutoDock Tools 1.5.6 and Discovery Studio software [60,61]. For Levcromakalim, docking studies predict the interaction with the K_ATP channel, helping identify key binding sites and assess binding energy. Docking can determine the most stable configuration through simulations of various binding poses [62,63].
Results and Discussion
Molecular Geometry
Levcromakalim was optimized using DFT, providing a comprehensive understanding of the molecular structure and potential interactions with the ATP-sensitive potassium (K_ATP) channel. This computational approach helped refine the molecule’s geometry by minimizing bond lengths and angles, crucial for effective binding and interaction with the K_ATP channel. The prominent bond lengths, C-N, C-O, and C-H, were within the typical range of 1.2 to 1.5 Å. The O1-C8, O1-C12, O2-C7, and N4-C6 bonds obtained bond lengths of 1.462 Å, 1.356 Å, 1.419 Å, and 1.462 Å, respectively. Bond angles, particularly those involving sp² hybridized carbon atoms, were optimized to ensure that Levcromakalim maintained the correct spatial arrangement for optimal interaction. The C8-O1-C12 bond angle was 118.9°, O1-C8-C7 was 107.2°, O1-C8-C15 was 104.7°, and O1-C8-C16 was 109.2°, all of which fell within the desired range of 110° to 120°. These angles suggested a favorable molecular geometry that supported the stability of Levcromakalim. Optimization also included adjustments to the dihedral angles to ensure that the title compound adopted the correct orientation for efficient binding to the K_ATP channel. The optimized structure of Levcromakalim is shown in Figure 3. Bond lengths (42 Å) and bond angles (75 °) are shown in Table 2.

Figure 3: Optimized structure of Levcromakalim.
| Bond Length(Å) | B3LYP/6-311++G (d,p) | Bond Angle (°) | B3LYP/6-311++G (d,p) |
| O1-C8 | 1.462 | C8-O1-C12 | 118.9 |
| O1-C12 | 1.356 | C7-O2-H37 | 108.4 |
| O2-C7 | 1.419 | C6-N4-C10 | 124.1 |
| O2-H37 | 0.964 | C6-N4-C13 | 121.4 |
| O3-C13 | 1.216 | C10-N4-C13 | 113.0 |
| N4-C6 | 1.462 | N4-C6-C7 | 110.7 |
| N4-C10 | 1.468 | N4-C6-C9 | 113.6 |
| N4-C13 | 1.383 | N4-C6-H22 | 104.2 |
| N5-C21 | 1.156 | C7-C6-C9 | 110.4 |
| C6-C7 | 1.536 | C7-C6-H22 | 108.0 |
| C6-C9 | 1.521 | C9-C6-H22 | 109.5 |
| C6-H22 | 1.095 | O2-C7-C6 | 111.6 |
| C7-C8 | 1.542 | O2-C7-C8 | 108.3 |
| C7-H23 | 1.1 | O2-C7-H23 | 109.9 |
| C8-C15 | 1.524 | C6-C7-C8 | 111.4 |
| C8-C16 | 1.53 | C6-C7-H23 | 109.1 |
| C9-C12 | 1.405 | C8-C7-H23 | 106.4 |
| C9-C17 | 1.392 | O1-C8-C7 | 107.2 |
| C10-C11 | 1.542 | O1-C8-C15 | 104.7 |
| C10-H24 | 1.092 | O1-C8-C16 | 109.2 |
| C10-H25 | 1.096 | C7-C8-C15 | 110.7 |
| C11-C14 | 1.535 | C7-C8-C16 | 113.3 |
| C11-H26 | 1.093 | C15-C8-C16 | 111.3 |
| C11-H27 | 1.09 | C6-C9-C12 | 119.9 |
| C12-C18 | 1.402 | C6-C9-C17 | 121.5 |
| C13-C14 | 1.524 | C12-C9-C17 | 118.6 |
| C14-H28 | 1.09 | N4-C10-C11 | 103.1 |
| C14-H29 | 1.095 | N4-C10-H24 | 111.2 |
| C15-H30 | 1.09 | N4-C10-H25 | 110.7 |
| C15-H31 | 1.092 | C11-C10-H24 | 112.4 |
| C15-H32 | 1.092 | C11-C10-H25 | 111.9 |
| C16-H33 | 1.092 | H24-C10-H25 | 107.7 |
| C16-H34 | 1.092 | C10-C11-C14 | 104.0 |
| C16-H35 | 1.091 | C10-C11-H26 | 109.7 |
| C17-C19 | 1.399 | C10-C11-H27 | 111.8 |
| C17-H36 | 1.084 | C14-C11-H26 | 110.1 |
| C18-C20 | 1.382 | C14-C11-H27 | 113.5 |
| C18-H38 | 1.083 | H26-C11-H27 | 107.8 |
| C19-C20 | 1.406 | O1-C12-C9 | 123.2 |
| C19-C21 | 1.429 | O1-C12-C18 | 116.4 |
| C20-H39 | 1.083 | C9-C12-C18 | 120.4 |
| O3-C13-N4 | 125.2 | ||
| O3-C13-C14 | 127.1 | ||
| N4-C13-C14 | 107.7 | ||
| C11-C14-C13 | 104.6 | ||
| C11-C14-H28 | 114.7 | ||
| C11-C14-H29 | 112.3 | ||
| C13-C14-H28 | 110.4 | ||
| C13-C14-H29 | 107.4 | ||
| H28-C14-H29 | 107.3 | ||
| C8-C15-H30 | 110.0 | ||
| C8-C15-H31 | 110.6 | ||
| C8-C15-H32 | 109.9 | ||
| H30-C15-H31 | 108.8 | ||
| H30-C15-H32 | 109.1 | ||
| H31-C15-H32 | 108.5 | ||
| C8-C16-H33 | 109.6 | ||
| C8-C16-H34 | 112.1 | ||
| C8-C16-H35 | 109.8 | ||
| H33-C16-H34 | 108.0 | ||
| H33-C16-H35 | 108.9 | ||
| H34-C16-H35 | 108.3 | ||
| C9-C17-C19 | 121.4 | ||
| C9-C17-H36 | 119.4 | ||
| C19-C17-H36 | 119.2 | ||
| C12-C18-C20 | 120.4 | ||
| C12-C18-H38 | 118.4 | ||
| C20-C18-H38 | 121.2 | ||
| C17-C19-C20 | 119.3 | ||
| C17-C19-C21 | 120.2 | ||
| C20-C19-C21 | 120.5 | ||
| C18-C20-C19 | 119.9 | ||
| C18-C20-H39 | 120.3 | ||
| C19-C20-H39 | 119.8 | ||
| N5-C21-C19 | 179.7 |
Table 2: Optimized Geometrical Parameters for Levcromakalim.
For Levcromakalim, the minimized energy was found to be -955.9898433 a.u., indicating the most stable conformation. This energy value reflected an energetically favorable state for binding to the K_ATP channel, suggesting that the title compound was in a low-energy, stable configuration. Such a configuration was essential for efficient interactions with the protein target, ensuring that Levcromakalim could adopt the proper shape and orientation required for many pharmacological activities. This stable conformation further enhanced the potential for modulating the K_ATP channel, thereby supporting its therapeutic potential [64].
UV-Vis analysis
UV-Vis analysis serves as a vital technique for investigating the absorption behavior of compounds in the ultraviolet and visible regions of the electromagnetic spectrum. This method typically covers the 200–600 nm range, with ultraviolet light spanning 10–400 nm and visible light from 400–600 nm [52,53]. In the present study, the UV-Vis absorption spectrum of Levcromakalim was theoretically predicted using the TD-DFT approach. Figure 4 illustrates the computed spectrum, while Table 3 summarizes the associated electronic transitions and properties.

Figure 4: Theoretical UV-Vis spectrum for Levcromakalim.
| Theoretical | TD/DFT | 6-311++G(d,p) | |||
| Phase | Wavelength (nm) | Band gap (eV) | Energy (cm-1) | Oscillatory strength | Assignments |
| GAS | 252 | 4.67 | 39592.14 | 0.3551 | HOMO->LUMO (69%) |
Table 3: UV-Vis Properties of Levcromakalim using TD-DFT/B3LYP Method.
A prominent absorption peak was identified at 252 nm, which lies within the mid-UV region of the spectrum. This peak is attributed to an electronic transition from the HOMO to the LUMO, associated with an excitation energy of 4.67 eV and an oscillator strength of 0.3551, indicating a moderately allowed transition. This behavior reflects a π→π* transition, which is characteristic of conjugated systems, suggesting that only a moderate energy input is required to promote electron excitation in the molecule.
Frontiers analysis (FMO)
FMO analysis is crucial for assessing a compound’s electronic properties, stability, and reactivity. HOMO indicates a molecule’s electron donation ability, while the LUMO shows its electron acceptance tendency. The energy difference, or band gap, is crucial for assessing a compound’s stability and reactivity. A larger HOMO–LUMO gap typically correlates with greater stability and lower reactivity, while a smaller gap suggests higher reactivity due to the reduced energy needed for electron excitation [65,66]. Table 4 provides Levcromakalim’s computed global reactivity parameters, offering valuable insights into its electronic behavior.
For Levcromakalim, the HOMO and LUMO energies were calculated to be –6.773 eV and –1.558 eV, respectively, yielding a HOMO–LUMO energy gap (ΔE) of 5.215 eV. This relatively large gap suggests that Levcromakalim is electronically stable and not highly reactive under typical physiological conditions. Using Planck’s relation: λ = hc/E, where h is Planck’s constant (6.626 × 10⁻³⁴ J·s), c is the speed of light (3.0 × 10⁸ m/s), and E is the band gap energy, the corresponding wavelength is found to be 238 nm. This falls within the mid-UV range and aligns with the TD-DFT-predicted UV-Vis absorption peak, further confirming the compound’s electronic characteristics.
| Parameter | GAS PHASE |
| HOMO (eV) | -6.773 |
| LUMO (eV) | -1.558 |
| Ionization potential | 6.773 |
| Electron affinity | 1.558 |
| Energy gap (eV) | 5.215 |
| Electronegativity | 4.166 |
| Chemical potential | -4.166 |
| Chemical hardness | 2.608 |
| Chemical softness | 0.192 |
| Electrophilicity index | 3.327 |
Table 4: Calculated energy value and global reactivity parameters of Levcromakalim..
The Ionization Potential (IP), which is related to the HOMO, was determined to be 6.733 eV, representing the energy required to remove an electron. The Electron Affinity (EA), associated with the LUMO, was calculated at 1.558 eV, indicating the energy change upon electron addition. From these values, Levcromakalim’s electronegativity (χ) is 4.166, suggesting a moderate tendency to attract electrons in bonding interactions [50]. The chemical hardness (η) was found to be 2.608 eV, implying significant resistance to changes in electron density and indicating enhanced molecular stability. In contrast, the chemical softness (S) was calculated to be 0.192, a relatively low value, consistent with the characteristics of biologically safe and low-toxicity molecules [67].
Moreover, Levcromakalim’s electrophilicity index (ω) was computed as 3.327 eV, classifying it as a potent electrophile. This suggests that the compound strongly tends to accept electrons, making it potentially suitable for selective interactions with nucleophilic biological targets, such as enzymes or ion channels. Together, these parameters highlight Levcromakalim’s chemical stability, low toxicity, and its promising potential in pharmaceutical applications, particularly those involving ion-channel modulation [68,69].
Drug likeness
Drug likeness refers to the set of chemical properties that have the potential to be developed into an effective pharmaceutical compound [70]. Levcromakalim demonstrated several key pharmacokinetic characteristics that align with these properties, making it a promising candidate to be developed into a drug. It adhered to Lipinski’s Rule Of 5 (LRO5) [71], which includes criteria such as a molecular weight under 500 g/mol, fewer than 5 Hydrogen Bond Acceptors (HBA), fewer than 10 Hydrogen Bond Donors (HBD), and a logP value under 5 [72,73]. For Levcromakalim, an HBD value of 1 and an HBA count of 4 are within desirable limits, promoting good bioavailability. Molar logP (0.72) indicated balanced lipophilicity. The title compound’s molar refractivity is 80.25, within the optimal range of 40-130, reflecting a suitable balance of size and flexibility for biological interactions. With only one rotatable bond, Levcromakalim exhibited enhanced stability. The molecular weight of 286.33 g/mol was well below the threshold (500 g/mol), suggesting favorable pharmacokinetics. A bioavailability score of 0.55 indicates the pharmaceutical nature of Levcromakalim. It also satisfies the Ghose, Veber, Egan, and Muegge filters, which collectively evaluate criteria such as molecular weight, lipophilicity, flexibility, and polarity for predicting oral bioavailability. Levocrakalim demonstrates high gastrointestinal (GI) absorption, suggesting it is well-suited for oral administration. It is not permeant to the blood-brain barrier (BBB), which limits its application for Central Nervous System (CNS) targeted therapies. Importantly, Levcromakalim is a P-glycoprotein (P-gp) substrate, indicating it may be subject to active efflux from cells, which can influence its bioavailability and tissue distribution. To evaluate the toxicity of Levcromakalim, toxicity prediction was performed using the ProTox 3.0 web server [74]. The analysis revealed that Levcromakalim falls under the “inactive” category for cytotoxicity (Table 5), predicting that the compound is non-toxic. This computational analysis suggests a favorable safety profile, which is essential for its consideration as a potential therapeutic agent in cancer treatment. Inactive-cytotoxicity implies that the compound is unlikely to induce cell damage at therapeutic concentrations. To experimentally verify this prediction, a cytotoxicity study using the MTT assay can be performed. These properties highlighted Levcromakalim as a promising candidate for drug development, with characteristics that supported effective oral administration and desirable pharmacological action. The pharmacokinetic properties for Levcromakalim are listed in Table 5.
| Descriptor | Desired range | Levcromakalim
|
| Hydrogen Bond Donor (HBD) | <10
| 1 |
| Hydrogen Bond Acceptor (HBA) | <5
| 4 |
| MLogP | <4.15 | 0.72 |
| Molar Refractivity | 40-130 | 80.25 |
| Number of rotatable bonds | <10 | 1 |
| Molecular weight | <500 | 286.33 g/mol |
| Bioavailability score | ≤0.85 | 0.55 |
| Blood-Brain Barrier | Yes/ No | No |
| Gastrointestinal absorption | High/low | High |
| P-glycoprotein | Yes/ No | Yes |
| Lipinski’s Rule of 5 | 0 | 0 |
| Ghose | 0 | 0 |
| Veber | 0 | 0 |
| Egan | 0 | 0 |
| Muegge | 0 | 0 |
| Cytotoxicity | Active/Inactive | Inactive |
Table 5: Drug Likeness Properties for Levcromakalim.
Molecular Docking
Molecular docking is an advanced theoretical methodology to predict how a ligand interacts with a target protein, such as an enzyme, receptor, or ion channel [75]. Levcromakalim was docked with the 5WTR (prokaryotic TRIC channel) protein to regulate the flow of potassium ions (K+) across the cell membrane [76,77]. The docking results revealed that Levcromakalim binds effectively to the ion channel. The binding energy of Levcromakalim with the 5WTR of the K_ATP channel has a higher negative value of -6.59 kcal/mol (Table 6), indicating that the atoms come closer to create a strong interaction between the ligand and the protein to form a ligand-protein gated channel. This binding energy suggests that Levcromakalim facilitates activation of the K_ATP channel and regulates the flow of K⁺ ions from the cytoplasm to extracellular space guided by the electrochemical gradient [42,78]. This might lead to proper membrane potential, which sends proper triggering signals to unmask p53 by triggering ATM & ATR, thus activating the checkpoint mechanisms in cell division and promoting cell apoptosis in cancerous tissues [79]. Figure 5 illustrates the docking pose of Levcromakalim with the 5WTR protein, showing the interaction and binding site. Table 6 summarizes the binding energy values, highlighting the optimal interaction between Levcromakalim and the K_ATP channel protein.

Figure 5: Docking pose of Levcromakalim with the 5WTR K+ channel protein.
| Protein | Ligand | Bond residue | Interactions | Bond distance (Å) | Binding Energy (kcal/mol) | Inhibition constant (µm) | Ref. RMSD |
| 5WTR | Levcromakalim | ASN9 | Hydrogen bond | 2.058 | -6.59 | 14.71 | 109.83 |
Table 6: Molecular docking analysis for Levcromakalim.
Conclusion
The abnormality of cellular processes and organelles significantly contributes to cancer development and progression. Understanding the complex interactions between normal cells, organelles, and cancer cells is essential for creating effective therapeutic strategies. The hypothesis of this theoretical work emphasizes the importance of Levcromakalim’s interactions with the potassium (K+) ion channel to maintain Vm between -40 mV and -80 mV for proper signals to reactivate p53, preventing tumor cells from evading regulatory checkpoints and thus, apoptosis. Activating the body’s self-repair mechanism could significantly improve cancer treatment outcomes.
The optimization results obtained through DFT calculations show Levcromakalim’s reactive nature and suitability for pharmacological applications. The UV-Vis and FMO analyses of Levcromakalim reveal its electronic stability and reactivity. Its moderate electrophilicity points to Levcromakalim’s promising potential for pharmaceutical applications, particularly in the modulation of ion channels. Theoretical toxicity studies predict that the title compound is non-toxic in nature. Molecular docking of Levcromakalim with the 5WTR protein reveals that Levcromakalim effectively binds to the K_ATP channel, with a binding energy of -6.79 kcal/mol, indicating a strong interaction between the ligand (title compound) and the ion channel protein (5WTR). These theoretical outcomes predict that Levcromakalim may be a potential therapeutic compound for cancer treatment, highlighting the hypothesis of the work.
This theoretical approach can be extended to molecular dynamics, experimental studies, such as in vitro and in vivo assay studies, and clinical studies. Rectification of ion channels that lead to proper membrane potential maybe a crucial step toward more effective cancer treatments and, ultimately, a cancer-free society.
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